AAC1

Detailed view of all the hits for database pfam with matching probability above the "Probability threshold" entered in the field below.

Pressing the "Preview clustering" button will display which cluster each hit will be grouped into, based on the parameters entered in the boxes below. Hits are clustered together when the location in the genome of both their edges is the same within the specified tolerance. The resulting combined hit (cluster) limits are the widest ones to fully contain all the hits that belong to it. Higher tolerance requirements means looser criteria for clustering hits together, and thus lead to less clusters.

When satisfied with the choice of probability threshold and clustering parameters, a summary of the resulting clusters can be visualised for all databases by pressing the "Go to summary view" button.